Simulation

This module generates simulated datasets with mimic UMIs.

• Parameters required by “simulation”

result_dir, input_file, num_workers, chunks_num, reads_chunks_num, iso_change_detail, top_n, min_read_len

high_freq_thre, max_error_freq, save_graph, graph_visualization, drawing_graph_num

See parameter descriptions at Parameters

• Usage

noise2read -m simulation -i path/to/raw.fastq -d ./results/